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@techreport{gx1801,
	Author = {David Lawrence},
	Date-Added = {2011-10-20 16:56:41 -0400},
	Date-Modified = {2011-10-20 16:58:18 -0400},
	Institution = {JLab},
	Number = {GlueX-doc-1801},
	Title = {BCAL Segmentation},
	Year = {2011}}

@techreport{gx1474,
	Author = {Irina Semenova and Andrei Semenov},
	Date-Added = {2011-09-19 09:18:05 -0400},
	Date-Modified = {2011-09-19 10:17:27 -0400},
	Institution = {Univ. of Regina},
	Number = {GlueX-doc-1474},
	Title = {BCAL Dynamic Range from the Simulation with FLUKA},
	Year = {2010}}

@misc{sipm_spec_sheet,
	Author = {Hamamatsu},
	Date-Added = {2011-09-07 15:18:13 -0400},
	Date-Modified = {2011-09-07 15:22:33 -0400},
	Howpublished = {\url{http://sales.hamamatsu.com/assets/pdf/parts_S/s10362-33series_kapd1023e05.pdf}},
	Title = {MPPC(Multi-Pixel Photon Counter) S10362-33 serries and S10931 series spec. sheet},
	Year = {2009}}

@misc{BCAL_sim1,
	Author = {Andrei Semenov},
	Date-Added = {2011-08-25 10:11:51 -0400},
	Date-Modified = {2011-08-25 10:13:17 -0400},
	Howpublished = {\url{http://www.jlab.org/Hall-D/software/wiki/images/b/b4/Time_simulation_uofr_meeting110617.pdf}},
	Month = {June},
	Title = {Simulation of Timing and Collected Energy from Spatially-Distributed Source (Shower)},
	Year = {2011}}

@misc{BCAL_thresh1,
	Author = {David Lawrence},
	Date-Added = {2011-08-23 15:38:26 -0400},
	Date-Modified = {2011-08-23 16:08:36 -0400},
	Howpublished = {\url{http://www.jlab.org/Hall-D/software/wiki/index.php/BCAL_Threshold_Calculation}},
	Lastchecked = {2011-08-23},
	Title = {BCAL Threshold Calculation (wiki page)},
	Urldate = {2011-06-02}}

@misc{BCAL_thresh2,
	Author = {David Lawrence},
	Date-Added = {2011-08-23 15:35:14 -0400},
	Date-Modified = {2011-08-23 16:09:35 -0400},
	Howpublished = {\url{http://www.jlab.org/Hall-D/software/wiki/images/3/3f/20110722_bcal.pdf}},
	Title = {BCAL Signal Timing Distributions},
	Urldate = {2011-08-23}}

@techreport{gx1069,
	Author = {Andrei Semenov and George J. Lolos and Kathryn Janzen and Irina Semenova and Zisis Papandreou},
	Date-Added = {2011-08-23 14:29:19 -0400},
	Date-Modified = {2011-08-23 14:30:49 -0400},
	Institution = {Univ. of Regina},
	Number = {GlueX-doc-1069-v2},
	Title = {Number of Photoelectrons extracted using a SiPMPlus Array and BCAL Module 2},
	Year = {2008}}

@techreport{gx1754,
	Author = {Yi Qiang and Carl Zorn},
	Date-Added = {2011-08-23 14:26:18 -0400},
	Date-Modified = {2011-08-23 14:27:15 -0400},
	Institution = {Jefferson Lab},
	Number = {GlueX-doc-1754-v3},
	Title = {Report on SiPM First Article Testing},
	Year = {2011}}

@techreport{gx1791,
	Author = {Stamatis Katsaganis and Zisis Papandreou},
	Date-Added = {2011-08-23 13:45:46 -0400},
	Date-Modified = {2011-08-23 13:46:52 -0400},
	Institution = {Univ. of Regina},
	Number = {GlueX-doc-1791-v1},
	Title = {BCAL Standalone Simulations},
	Year = {2011}}

@techreport{gx1795,
	Author = {Fernando J. Barbosa},
	Date-Added = {2011-08-23 12:47:29 -0400},
	Date-Modified = {2011-08-23 16:11:28 -0400},
	Institution = {Jefferson Lab},
	Number = {Gluex-doc-1795},
	Title = {The BCAL SiPM Array Readout},
	Year = {2011}}

@misc{SF_Semenov,
	Author = {Irina Semenova and Andrei Semenov},
	Date-Added = {2011-08-23 11:55:03 -0400},
	Date-Modified = {2011-08-23 16:10:17 -0400},
	Howpublished = {\url{http://www.jlab.org/Hall-D/software/wiki/images/c/c5/Sampling_fluctuations_uofr_meet110819.pdf}},
	Title = {EXTRACTION OF SAMPLING FLUCTUATIONS IN BCAL READOUT CELLS (pre-preliminary)},
	Urldate = {2011-08-23}}

@techreport{gx827,
	Author = {Blake Leverington},
	Date-Added = {2011-08-23 11:21:08 -0400},
	Date-Modified = {2011-08-23 11:22:12 -0400},
	Institution = {Univ. of Regina},
	Number = {GlueX-doc-827},
	Title = {Regina BCAL Standalone MC - Sampling Fraction Fluctuations},
	Year = {2007}}

@techreport{gx1710,
	Author = {David Lawrence},
	Date-Added = {2011-08-23 10:33:12 -0400},
	Date-Modified = {2011-08-23 10:36:00 -0400},
	Institution = {Jefferson Lab},
	Number = {GlueX-doc-1710-v1},
	Title = {BCAL Splitoffs},
	Year = {2011}}

@manual{Brun:fk,
	Author = {R Brun and Bruyant, F and Maire, M and McPherson, AC and Zanarini, P},
	Date-Added = {2011-03-07 09:21:04 -0500},
	Date-Modified = {2011-03-07 09:23:52 -0500},
	Edition = {W5013},
	Organization = {CERN},
	Title = {{GEANT3}},
	Year = {1993}}

@misc{gx1499,
	Author = {David Lawrence},
	Date-Added = {2011-03-07 09:01:42 -0500},
	Date-Modified = {2011-03-07 09:02:28 -0500},
	Howpublished = {slides shown at May 2010 collab. meeting},
	Month = {May},
	Title = {Calorimeter Clustering Issues},
	Year = {2011}}

@misc{gx951,
	Author = {M. Kornicer},
	Date-Added = {2011-03-07 08:57:47 -0500},
	Date-Modified = {2011-03-07 08:59:34 -0500},
	Howpublished = {slides shown at Jan. 2008 collab. meeting},
	Month = {Jan.},
	Title = {GlueX all-neutral reconstruction},
	Year = {2008}}

@techreport{gx569,
	Author = {C. Xu and M. Barbi and G.Huber},
	Date-Added = {2011-03-07 08:37:00 -0500},
	Date-Modified = {2011-03-07 08:38:27 -0500},
	Institution = {Univ. of Regina},
	Title = {The GlueX BCAL Reconstruction Code - Preliminary Studies},
	Year = {2005}}

@techreport{LASS,
	Author = {D. Aston et al.},
	Date-Added = {2010-09-03 13:55:56 -0400},
	Date-Modified = {2010-09-03 13:59:12 -0400},
	Institution = {SLAC},
	Number = {SLAC-298},
	Title = {The LASS Spectrometer},
	Year = {1986}}

@techreport{gx1542,
	Author = {David Lawrence and Simon Taylor},
	Date-Added = {2010-07-22 16:40:44 -0400},
	Date-Modified = {2010-07-22 16:42:17 -0400},
	Institution = {Jefferson Lab},
	Number = {GlueX-doc-1542-v1},
	Title = {Hall-D Solenoid Magnet Specifications},
	Year = {2010}}

@misc{poisson,
	Date-Added = {2010-07-22 16:28:33 -0400},
	Date-Modified = {2010-07-22 16:34:09 -0400},
	Howpublished = {http://laacg1.lanl.gov/laacg/services/download\_sf.phtml},
	Title = {Poisson/Superfish}}

@techreport{gx672,
	Author = {Nikolay Kolev},
	Date-Added = {2010-06-09 17:40:06 -0400},
	Date-Modified = {2010-06-09 20:10:48 -0400},
	Institution = {Univ. of Regina},
	Number = {GlueX-doc-672-v5},
	Title = {Hall-D Calibration Database Table Design and Interface},
	Year = {2006}}

@article{jana_chep09,
	Author = {David Lawrence},
	Date-Added = {2010-03-08 13:26:30 -0500},
	Date-Modified = {2010-06-09 17:25:18 -0400},
	Journal = {Journal of Physics: Conference Series},
	Pages = {(6pp)},
	Title = {The JANA calibrations and conditions database API},
	Url = {http://iopscience.iop.org/1742-6596/219/4/042011/},
	Volume = {219 part 4},
	Year = {2009 doi: 10.1088/1742-6596/219/4/042011},
	Bdsk-Url-1 = {http://iopscience.iop.org/},
	Bdsk-Url-2 = {http://iopscience.iop.org/1742-6596/219/4/042011/}}

@proceedings{jana_acat08,
	Address = {http://pos.sissa.it/archive/conferences/070/062/ACAT08_062.pdf},
	Author = {D. Lawrence},
	Date-Added = {2010-03-08 13:14:33 -0500},
	Date-Modified = {2010-03-08 13:18:57 -0500},
	Journal = {Processings of Science},
	Number = {062},
	Organization = {ACAT08},
	Publisher = {SISSA},
	Title = {Multi-threaded event processing with JANA},
	Year = {2008}}

@article{gluex_cipanp09_shepherd,
	Author = {Shepherd,Matt},
	Date-Added = {2009-06-30 07:54:56 -0400},
	Date-Modified = {2009-11-02 08:44:10 -0500},
	Journal = {CIPANP2009},
	Title = {GlueX (in Hall D at the upgraded Jefferson Lab)},
	Year = {2009}}

@article{12gev_panic08,
	Author = {Smith, Elton},
	Date-Added = {2009-06-30 07:49:32 -0400},
	Date-Modified = {2009-06-30 07:53:43 -0400},
	Journal = {arXiv:0901.3249/nucl-ex},
	Title = {The 12-GeV JLab Upgrade Project},
	Year = {2008}}

@article{tof_timing,
	Author = {Denisov, Serguei and others},
	Date-Added = {2009-06-24 05:52:13 -0400},
	Date-Modified = {2009-06-29 09:46:37 -0400},
	Journal = {Nucl. Instrum. and Meth. A},
	Month = {June},
	Pages = {183-187},
	Title = {Systematic studies of timing characteristics for 2m long scintillation counters},
	Volume = {525},
	Year = {2004}}

@article{e852,
	Author = {Crittenden, Ray R. and others},
	Date-Added = {2009-06-24 05:37:10 -0400},
	Date-Modified = {2009-06-29 09:49:28 -0400},
	Journal = {Nucl. Instrum. and Meth. A},
	Month = {March},
	Pages = {377-394},
	Title = {A 3000 element lead-glass electromagnetic calorimeter},
	Volume = {387},
	Year = {1997}}

@article{kloe,
	Author = {Adinolfi, M. and others},
	Date-Added = {2009-06-24 05:26:29 -0400},
	Date-Modified = {2009-06-29 09:48:09 -0400},
	Journal = {Nucl. Instrum. and Meth. A},
	Pages = {326-331},
	Title = {The KLOE electromagnetic calorimeter},
	Volume = {494},
	Year = {2002}}

@article{bcal_proto,
	Author = {Leverington, Blake~D. and others},
	Date-Added = {2009-06-24 05:12:23 -0400},
	Date-Modified = {2009-06-29 09:45:38 -0400},
	Journal = {Nucl. Instrum. and Meth. A},
	Pages = {327-337},
	Title = {Performance of the prototype module of the GlueX electromagnetic barrel calorimeter},
	Volume = {596},
	Year = {2008},
	Bdsk-File-1 = {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}}

@misc{proof,
	Author = {Maarten Ballintijn and Rene Brun and Fons Rademakers and Gunther Roland},
	Date-Added = {2009-06-04 15:15:27 -0400},
	Date-Modified = {2009-06-04 15:18:36 -0400},
	Howpublished = {arXiv:physics/0306110v1},
	Month = {June},
	Title = {The PROOF Distributed Parallel Analysis Framework based on ROOT},
	Year = {2003}}

@url{openssl,
	Date-Added = {2009-05-14 12:27:34 -0400},
	Date-Modified = {2009-05-14 12:29:31 -0400},
	Title = {http://www.openssl.org/},
	Urldate = {2009-05-14}}

@techreport{soap1.1,
	Address = {http://www.w3.org/TR/2000/NOTE-SOAP-20000508},
	Author = {Don Box and David Ehnebuske and Gopal Kakivaya and Andrew Layman and Noah Mendelsohn and Henrik Nielsen and Satish Thatte and Dave Winer},
	Date-Added = {2009-05-14 11:23:58 -0400},
	Date-Modified = {2009-05-22 09:27:59 -0400},
	Institution = {W3.org},
	Month = {July},
	Number = {NOTE-SOAP-20000508},
	Title = {Simple Object Access Protocol (SOAP) 1.1},
	Year = {2003}}

@proceedings{gsoap,
	Author = {Robert A. van Engelen and Kyle Gallivan},
	Date-Added = {2009-05-05 17:20:22 -0400},
	Date-Modified = {2009-05-05 17:23:58 -0400},
	Editor = {CCGrid2002},
	Month = {May},
	Organization = {2nd IEEE International Symposium on Cluster Computing and the Grid},
	Title = {The gSOAP Toolkit for Web Services and Peer-To-Peer Computing Networks},
	Year = {2002}}

@article{jana_chep07,
	Abstract = {The C++ reconstruction framework JANA has been written to support the next generation of Nuclear Physics experiments at Jefferson Lab in anticipation of the 12GeV upgrade. The JANA framework was designed to allow multi-threaded event processing with a minimal impact on developers of reconstruction software. As we enter the multi-core (and soon many-core) era, thread-enabled code will become essential to utilizing the full processor power available without invoking the logistical overhead of managing many individual processes. Event-based reconstruction lends itself naturally to multi-threaded processing. Emphasis will be placed on the multi-threading features of the framework. Test results of the scaling of event processing rates with number of threads are presented.},
	Author = {D Lawrence},
	Date-Added = {2008-11-21 13:10:28 -0500},
	Date-Modified = {2008-11-21 13:11:04 -0500},
	Journal = {Journal of Physics: Conference Series},
	Number = {4},
	Pages = {042018 (6pp)},
	Title = {Multi-threaded event reconstruction with JANA},
	Url = {http://stacks.iop.org/1742-6596/119/042018},
	Volume = {119},
	Year = {2008},
	Bdsk-Url-1 = {http://stacks.iop.org/1742-6596/119/042018}}

@techreport{gx990,
	Author = {Curtis A. Meyer and Yves VanHaarlem},
	Date-Added = {2008-06-24 13:55:05 -0400},
	Date-Modified = {2008-06-24 13:56:58 -0400},
	Institution = {Carnegie Mellon Univ.},
	Month = {March},
	Number = {GlueX-doc-990},
	Title = {The GlueX Central Drift Chamber},
	Year = {2008}}

@techreport{gx853,
	Author = {David Lawrence and Simon Taylor and Richard T. Jones},
	Date-Added = {2008-06-23 17:18:36 -0400},
	Date-Modified = {2008-06-24 00:08:31 -0400},
	Institution = {Jefferson Lab and Univ. of Connecticut},
	Month = {December},
	Number = {GlueX-doc-853},
	Title = {GlueX Simulation Geometry Version 4.0},
	Year = {2007}}

@techreport{gx1004,
	Author = {David Lawrence and Simon Taylor},
	Date-Added = {2008-06-23 17:12:07 -0400},
	Date-Modified = {2008-06-23 17:18:12 -0400},
	Institution = {Jefferson Lab},
	Month = {March},
	Number = {GlueX-doc-1004},
	Rating = {5},
	Read = {Yes},
	Title = {Track Finding and Fitting in GlueX: Development Report IV},
	Year = {2008}}

@webpage{CLAS,
	Date-Added = {2007-09-12 16:20:27 -0400},
	Date-Modified = {2007-09-12 16:20:47 -0400},
	Url = {http://www.jlab.org/Hall-B},
	Year = {2006},
	Bdsk-Url-1 = {http://www.jlab.org/Hall-B}}

@webpage{hyperthreads,
	Date-Added = {2007-09-12 16:19:24 -0400},
	Date-Modified = {2007-09-12 16:20:20 -0400},
	Month = {Jan.},
	Url = {http://www-128.ibm.com/developerworks/linux/library/l-htl},
	Year = {2003},
	Bdsk-Url-1 = {http://www-128.ibm.com/developerworks/linux/library/l-htl}}

@misc{pthreads,
	Date-Added = {2007-09-12 16:18:15 -0400},
	Date-Modified = {2007-09-12 16:23:15 -0400},
	Title = {IEEE Std. 1003.1 (pthreads)},
	Year = {2004}}

@article{gluex,
	Author = {A.~R.~Dzierba},
	Date-Added = {2007-09-12 16:16:17 -0400},
	Date-Modified = {2008-12-19 15:26:54 -0500},
	Journal = {hep-ex/0106010},
	Title = {QCD Confinement and the Hall D Project at Jefferson Lab},
	Year = {2001}}

@manual{ROOT508,
	Date-Added = {2007-09-12 16:14:55 -0400},
	Date-Modified = {2007-09-12 16:16:04 -0400},
	Edition = {5.08},
	Title = {ROOT~User's~Guide~5.08, Chapter~24:~Threads~ppg.~355-363~\emph{(pg 357)}},
	Url = {http://root.cern.ch},
	Year = {2005},
	Bdsk-Url-1 = {http://root.cern.ch}}

@techreport{intel2015,
	Author = {S.~Borkar H.~Mulder P.~Dubey S.~Powlowski K.~Kahn J.~Rattner D.~Kuck},
	Date-Added = {2007-09-12 16:12:45 -0400},
	Date-Modified = {2008-12-19 15:23:30 -0500},
	Institution = {Intel Corp. White Paper},
	Title = {Platform 2105: Intel Processor and Platform Evolution for the Next Decade},
	Year = {2005}}

@periodical{startcounter,
	Author = {Y. G. Sharabian},
	Date-Added = {2007-08-02 14:25:11 -0400},
	Date-Modified = {2007-08-02 14:27:08 -0400},
	Journal = {NIM},
	Pages = {246-258},
	Title = {A new highly segmented start counter for the CLAS detector},
	Volume = {556A},
	Year = {2006}}

@techreport{gx732,
	Author = {R. Jones},
	Date-Added = {2007-08-02 10:03:03 -0400},
	Date-Modified = {2007-08-02 10:06:47 -0400},
	Number = {732-v4},
	Title = {Detector Models for GlueX Monte Carlo Simulation: the CD2 Baseline},
	Type = {GlueX-doc},
	Year = {2007}}

@techreport{gx744,
	Author = {C. Meyer},
	Date-Added = {2007-08-02 09:38:48 -0400},
	Date-Modified = {2007-08-02 09:49:12 -0400},
	Institution = {CMU},
	Number = {744-v7},
	Title = {The GlueX Central Drift Chamber},
	Type = {GlueX-doc},
	Year = {2007}}

@url{mcfast,
	Author = {Fermilab Computer Division simulation group},
	Date-Added = {2007-05-21 08:17:45 -0400},
	Date-Modified = {2007-05-21 08:21:29 -0400},
	Lastchecked = {May 21, 2007},
	Title = {MCFast},
	Url = {http://cepa.fnal.gov/psm/simulation/mcfast/},
	Urldate = {June 28, 2004},
	Bdsk-Url-1 = {http://cepa.fnal.gov/psm/simulation/mcfast/}}

@article{Weygand:1990kh,
	Author = {Weygand, D. P.},
	Date-Modified = {2008-12-19 16:08:14 -0500},
	Journal = {Science at the KAON Factory Proceedings, Vancouver vol. 1* 6 p},
	Title = {{The Data acquisition system for Brookhaven experiment 852}},
	Year = {1990}}

@article{fruewirth,
	Author = {R. Fruewirth and A. Strandlie and W. Waltenberger},
	Journal = {Nuclear Instruments and Methods},
	Pages = {366-378},
	Title = {Helix fitting by an extended Riemann fit},
	Volume = {A490},
	Year = {2002}}

@article{mankel,
	Author = {R. Mankel},
	Journal = {Reports on Progress in Physics},
	Pages = {553-622},
	Title = {Pattern recognition and event reconstruction in particle physics experiments},
	Volume = {67},
	Year = {2004}}

@article{babar,
	Author = {B. Aubert et al.},
	Doi = {DOI: 10.1016/S0168-9002(01)02012-5},
	Issn = {0168-9002},
	Journal = {Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment},
	Number = {1},
	Pages = {1 - 116},
	Title = {The BaBar detector},
	Url = {http://www.sciencedirect.com/science/article/B6TJM-448FT2F-4/2/140b61729bcf8e41a8c475dc18313573},
	Volume = {479},
	Year = {2002},
	Bdsk-Url-1 = {http://www.sciencedirect.com/science/article/B6TJM-448FT2F-4/2/140b61729bcf8e41a8c475dc18313573},
	Bdsk-Url-2 = {http://dx.doi.org/10.1016/S0168-9002(01)02012-5}}

@article{Leverington2008327,
	Author = {B.D. Leverington and G.J. Lolos and Z. Papandreou and R. Hakobyan and G.M. Huber and K.L. Janzen and A. Semenov and E.B. Scott and M.R. Shepherd and D.S. Carman and D.W. Lawrence and E.S. Smith and S. Taylor and E.J. Wolin and F.J. Klein and J.P. Santoro and D.I. Sober and C. Kourkoumeli},
	Doi = {DOI: 10.1016/j.nima.2008.08.137},
	Issn = {0168-9002},
	Journal = {Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment},
	Keywords = {Scintillating fibres},
	Number = {3},
	Pages = {327 - 337},
	Title = {Performance of the prototype module of the GlueX electromagnetic barrel calorimeter},
	Url = {http://www.sciencedirect.com/science/article/pii/S0168900208013077},
	Volume = {596},
	Year = {2008},
	Bdsk-Url-1 = {http://www.sciencedirect.com/science/article/pii/S0168900208013077},
	Bdsk-Url-2 = {http://dx.doi.org/10.1016/j.nima.2008.08.137}}